Splice error point mutations

The following table provides an overview of currently known point mutations leading to splicing errors.

NameCaseMutation (OldNC) [1]Mutation (HGVS) [2]ResultSource
JLYHNDIVS1+1G>Ac.27+1G>Ainclusion of IVS1+1 to 49 in mRNA(Jinnah et al., 2010; Marcus et al., 1993a)
HHLNDIVS1+1G>Ac.27+1G>Anot reportednew
MM, Case 22-18HNDIVS1+1G>Tc.27+1G>Tinclusion of IVS1+1 to 49 in mRNA(Jinnah et al., 2010; Jinnah et al., 2000)
LN11B, LRLNDIVS1+1G>Tc.27+1G>Tinclusion of IVS1+1 to 49 in mRNA(Jinnah et al., 2000; Jinnah et al., 2006)
NSLNDIVS1+1G>Tc.27+1G>Tinclusion of IVS1+1 To 49 in mRNA(Yamada et al., 2004)
Family 3HNDIVS1+5G>Ac.27+5G>Ainclusion of extra sequences in mRNA plus frame shift(Yamada et al., 2007)
LN128, H6214, DCLNDIVS1+5G>Ac.27+5G>Asplice errornew
CSHRHIVS1+47C>Tc.27+47C>Tinclusion of extra sequences in mRNA(Gaigl et al., 2001)
NSLNDIVS1-1G>Cc.28-1G>Cexon 2 excluded(Yamada et al., 2004)
LN5, BNLNDIVS1-2A>Gc.28-2A>Gexon 2 excluded(Jinnah et al., 2000)
RJK 1760, CBLNDIVS1-2A>Tc.28-2A>Texon 2 excluded(Gibbs et al., 1990)
12/01, Family 28LNDIVS2+1G>Cc.134+1G>Cnot reported(Bertelli et al., 2004; de Gemmis et al., 2010)
JCHNDIVS2+1G>Ac.134+1G>Aexon 2 excluded(Jinnah et al., 2000)
THLNDIVS2-1G>Ac.135-1G>Anot reportednew
LN175 LNDIVS2-2A>Gc.135-2A>Gexon 3 excludednew
LN35, COLND209G>Tc.209G>Texclusion of bases 208-318(Jinnah et al., 2000)
NSLNDIVS3+1G>Cc.318+1G>Cexon 3 excluded(Nguyen et al., 2011)
KeioLNDIVS3+1G>Tc.318+1G>Texon 3 excluded(Yamada et al., 1993)
LN132, JC LNDIVS3+1G>Tc.318+1G>Texon 3 excludednew
NSLNDIVS3-1G>Tc.319-1G>Texon 4 excluded(Yamada et al., 2004)
LN66, MDLNDIVS3-2A>Gc.319-2A>Gexon 4 excluded(Jinnah et al., 2000)
Family 34LNDIVS3-2A>Gc.319-2A>Gexon 4 exclusion(de Gemmis et al., 2010)
JR, RRLNDIVS4+1G>Tc.384+1G>Texon 4 excluded(Jinnah et al., 2000)
LN204, AJZ LNDIVS4+1G>Tc.384+1G>Texon 4 excludednew
LN122, R LNDIVS4+1G>Tc.384+1G>Texon 4 excludednew
Case 9, Family 9LNDIVS4+1G>Ac.384+1G>Anot reported(Jinnah et al., 2006)
Case 2-2, PBHNDIVS4-1G>Ac.385-1G>Anot reported(Jinnah et al., 2010)
Family VLNDIVS4-1G>Ac.385-1G>Aexon 5 excluded(Jurecka et al., 2008; Popowska et al., 1998)
Patient 4LNDIVS4-1G>Ac.385-1G>Aexon 5 excluded(Mak et al., 2000)
BPLNDIVS4-1G>Ac.385-1G>Aexon 5 excludednew
Family 28LNDIVS4-2A>Cc.385-2A>Cexon 5 excluded(O'Neill, 2004)
IRdL, Case 13-10HNDIVS4-2A>Gc.385-2A>Gexon 5 excluded(Jinnah et al., 2010; Torres et al., 2010)
DBHNDIVS5+1G>Ac.402+1G>Aaberrant mRNA(Jinnah et al., 2000)
MPLNDIVS5+1G>Ac.402+1G>Asplice errornew
VPLNDIVS5+5A>Gc.402+5G>Asplice errornew
TLHRHIVS5+1229A>Gc.402+1229A>Gmultiple mRNAs(Sege-Peterson et al., 1992)
Richelieu, LN-MLNDIVS5-1G>Ac.403-1G>Aexon 6 excluded, 403delG(Jinnah et al., 2000)
NALNDIVS5-1G>Cc.403-1G>Cnot reported(Hou, 2006)
LN174 LNDIVS5-1G>Cc.403-1G>Cexon 5 excludednew
NSLNDIVS5-2A>Gc.403-2A>Gaberrant mRNA(Yamada et al., 2004)
NSLNDIVS6+1G>Ac.485+1G>Aexon 6 excluded(Willers et al., 1999)
Chermside, RWLNDIVS6+1G>Ac.485+1G>Aexon 6 excluded(Gordon et al., 1991)
Family 29LNDIVS6+1G>Ac.485+1G>Aexon 6 excluded(de Gemmis et al., 2010)
Patient ALNDIVS6+1G>Cc.485+1G>Cexon 6 excluded(Mizunuma et al., 2001)
Family of 5, Family 30LND/HNDIVS6+2T>Cc.485+2T>Cexon 6 excluded(de Gemmis et al., 2010; Hladnik et al., 2008)
100-00HNDIVS6+5G>Ac.485+5G>Aexon 6 excluded(Corrigan et al., 2011)
LN203B, JS; DSLNVIVS6+5G>Ac.485+5G>Aexon 6 excludednew
31-99LNDg.36221T>Ac.485+2775T>Acreat functional splice site that combines with a downstream cryptic splice site leading mRNA insertion(Corrigan et al., 2011)
AQLNDIVS6-1G>Ac.486-1G>Asplice errornew
LN126, BM LNDIVS6-3C>Gc.486-3C>Gexon 7 excludednew
DL[1]LNDIVS7+1G>Ac.532+1G>Aexon 7 excluded(Jinnah et al., 2000)
LN158, JCG LNDIVS7+1G>Ac.532+1G>Aexon 7 excludednew
LN217, TM LNDIVS7+1G>Ac.532+1G>Aexon 7 excludednew
NSLNDIVS7+1G>Ac.532+1G>Aexon 7 excluded(Yamada et al., 2011a; Yamada et al., 2011b)
PMK; WBKLNDIVS7+2G>Texon 7 excludedNew
NSHNDIVS7+2T>Cc.532+2T>Cexon 7 excluded, early termination(Yamada et al., 2004)
RJK 1934LNDIVS7+5G>Ac.532+5G>Aexon 7 excluded(Gibbs et al., 1990)
LN67, MPLNDIVS7+5G>Ac.532+5G>Aexon 7 excluded(Jinnah et al., 2000)
LN157, JH, CHLNDIVS7+5G>Ac.532+5G>Aexon 7 excluded(Jinnah et al., 2006)
NS[2]LNDIVS7+5G>Ac.532+5G>Aexon 7 excluded(Kim et al., 2009)
LN139B, H8475, HLNDIVS7+5G>Ac.532+5G>Aexon 7 excludednew
NSLNDIVS7+5G>Tc.532+5G>Texon 7 excludednew
NSLNDIVS7+5G>Cc.532+5G>Cexon 7 excluded(Willers et al., 1999)
3/00, Family 31LNDIVS7-1G>Ac.533-1G>Aexon 8 excluded(Bertelli et al., 2004; de Gemmis et al., 2010)
NSLNDIVS7-1G>Ac.533-1G>Aexon 8 excluded(Willers et al., 1999)
KDLNDIVS7-1G>Ac.533-1G>Asplice errornew
Sevilla, PPLNDIVS7-2A>Gc.533-2A>Gexon 8 excluded(Puig et al., 2001; Torres et al., 2000)
Family BLNDIVS7-9T>Ac.533-9T>Aexon 8 excluded(Kim et al., 1997)
NSLNDIVS7-9T>Ac.533-9T>Aexon 8 excluded(Yamada et al., 2004)
Patient BLNDIVS7-9T>Gc.533-9T>Gexon 8 excluded(Mizunuma et al., 2001)
BVLNDIVS7-13T>Gc.533-13T>Gexon 8 excludednew
NSLND538G > Ac.538G>Aexon 8 excluded (G180D))(Yamada et al., 2011a)
Case 10, Family 10LNDIVS8+1G>Ac.609+1G>Anot reported(Jinnah et al., 2006)
25-febLNDIVS8+1G>Ac.609+1G>Asplice junction(Corrigan et al., 2011)
RJK 888, GM 7092LNDIVS8+5G>Ac.609+5G>Aexon 8 excluded(Gibbs et al., 1990; Gibbs et al., 1989)
LN-I, PeruLNDIVS8+5G>Tc.609+5G>Texon 8 excluded(Jinnah et al., 2000)
LN29, JRLNDIVS8+6T>Gc.609+6T>Gexon 8 excluded(Jinnah et al., 2000)
LN172; LN203A (MB;LB)LNDIVS8+6T>Gc.609+6T>Gexon 8 excludednew
LN33LNDIVS8+6T>Cc.609+6T>Cexon 8 excluded(Jinnah et al., 2000)
NSLNDIVS8+6T>Cc.609+6T>Cexon 8 excluded(Willers et al., 1999)
NSLNDIVS8-1G>Ac.610-1G>A17 bp of exon 9 excluded(Yamada et al., 2004)
158/01, Family 33 [3]LNDIVS8-1G>Ac.610-1G>Anot reported(Bertelli et al., 2004; de Gemmis et al., 2010)
LN162, II LNDIVS8-1G>Ac.610-1G>A17 bp of exon 9 excludednew
FGLNDIVS8-1G>Ac.610-1G>Asplice errornew
17/00, Family 32LNDIVS8-1G>Cc.610-1G>Cnot reported(Bertelli et al., 2004; de Gemmis et al., 2010)
GDLNDIVS8-1G>Tc.610-1G>Tsplice errornew
RJK 906, GM 1899LNDIVS8-2A>Tc.610-2A>T17 bp of exon 9 excluded(Gibbs et al., 1990; Gibbs et al., 1989)
LN136,KBLNDIVS8-2A>Tc.610-2A>T610-626 bp of exon 9 excludednew
ASLNDIVS8-2A>Gc.610-2A>G17 bp of exon 9 excluded(Marcus et al., 1993a)

Notes:
[1] Previously reported as case 375 (Tarle et al., 1991) with a different result shown in Table 1.
[2] Previous reported as c.532+>A.
[3] Previous reported as IVS9-1G>A (Bertelli et al., 2004) and revised as c.610-1G>A (de Gemmis et al., 2010).